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Shiny apps & writing your PhD

14 April 2025

What does writing your PhD have to do with Shiny Apps? 

Shiny apps are R based interactive web applications that sit on a Shiny server. They make it easy for users to create plots and tables through a series of sliders or dropdowns. How to Write a PhD is already an interactive book in that readers can request alterations and additions (see here). But the book itself was static - until now. In the past 2 weeks, I have started to insert Shiny Apps into chapters where they might enhance content. 

The first example appears here in the chapter on Time Management. I know from my experience teaching students in my class on Writing Skills that although telling them that drawing a Gantt Diagram to plan their first year of studies sounds easy, they struggle with getting started. So here's a Shiny App that does just that: 

Don't take my word for it - have a go yourself!

The other Shiny App explains in set theory how Boolean Operators work. Here it is:

Perhaps more controversially, the last Shiny App shows you how you could get started on writing the first paragraph of your discussion. An oportunity to get input from AI is also provdided together with a caution: Please remember You may use the AI generated text to help and inspire you to compose your own text, but do not copy and paste it. A full explanation of why this is not acceptable can be found in an earlier chapter on using Artificial Intelligence. Here it is:

If you like these Shiny Apps, and have an idea about which app should come next in  How to Write a PhD or How to Publish Science, then let me know! 

  Lab  Writing

A talk for the Kunming Zoological Institute

10 April 2025

Visiting the Chinese Academy of Sciences - Kunming Zoological Institute

The Chinese Academy of Sciences hosts many of the premiere research institutions in China, including the Kunming Zoological Institute which shares its grounds with the Kunming Botanical Institute, a few kilometers north of downtown Kunming. I was very interested in meeting Che Jing and her research group, who have received international acclaim for their groundbreaking work on amphibians. In turn, they invited me to visit KZI and give a talk.

It was a great pleasure to meet so many keen and enthusiastic early career resaerchers, and all interested in amphibians. It was a special pleasure to meet Alex Karuno, originally from the Kenyan National Museum in Nairobi. Alex studied with Patrick Malonza before he moved to China to continue his PhD studies. You can find Patrick's name at the top of a list on my CV page

Alex should finish his PhD by the end of this year, and we wish him all the best for doing that! 

  Frogs  Lab  meetings

Becomong an adjunct professor in Hiroshima University, Japan

01 April 2025

Now an adjunct Professor in Japan!

Regular readers of this blog will know that I visited the Amphibian Research Centre at Hiroshima University in June 2024 (see blog post here). Since then, Profs. Takeshi Igawa and Hajime Ogino and I have been scheming for my return in 2025 when I will conduct a large experiment at the ARC. To make this all easier, I have been appointed as an adjunct Professor at the university. 

It is a great honour to be associated with such a great institution. I greatly look forward to conducting my research there.

  Frogs  Lab  Xenopus
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